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Computer vision I: introduction and image classification

    • Thursday, November 21, 2024, 9am-12pm CT
      • Lead: ARS SCINet Office
      • Prerequisites:
        • Familiarity with basic machine learning concepts. The workshop on November 20 will provide this background, if needed.
        • Familiarity with basic Python concepts and Jupyter notebooks. We will offer virtual training for these skills before the Forum begins.

This workshop will teach participants the concepts and tools they need to begin applying modern, deep learning-based computer vision methods to their own scientific research. This will be an interactive, hands-on workshop that will offer plenty of opportunities for practice and experiential learning. By the end of the session, participants will have trained and evaluated a state-of-the-art image classification model on a custom image dataset.

Tutorial setup instruction

Steps to prepare for the tutorial:

  1. Login to Atlas Open OnDemand at https://atlas-ood.hpc.msstate.edu/. For more information on login procedures for web-based SCINet access, see the SCINet access user guide.

  2. Open a command-line session by clicking on “Clusters” -> “Atlas Shell Access” on the top menu. This will open a new tab with a command-line session on Atlas’s login node.

  3. Request resources on a compute node by running the following command:

     srun --reservation=forum -A scinet_workshop1 -t 00:30:00 -n 1 --mem 8G --pty bash

  4. Create and/or update your workshop working directory and copy the tutorial materials into it by running the following commands. Note: you do not have to edit the commands with your username as it will be determined by the $USER variable.

     mkdir -p /90daydata/shared/$USER/computer_vision1
 cd /90daydata/shared/$USER/computer_vision1
 cp -r /project/ai_forum/computer_vision1/computer_vision_1.ipynb .
 cp -r /project/ai_forum/computer_vision1/*.py .

  5. Setup the kernel for JupyterLab. You will create a kernel called computer_vision_1_env to access from JupyterLab Server. Run the following commands to activate the workshop’s virtual environment and create a new kernelspec from it:

     source /project/ai_forum/computer_vision1/computer_vision_1_env/bin/activate
 ipython kernel install --name "computer_vision_1_env" --user

  6. Stop the interactive job on the compute node by running the command:

     exit

  7. Launch a JupyterLab Server session. Under the Interactive Apps menu, select JupyterLab Server. Specify the following input values on the page:

    • Account: scinet_workshop1
    • Partition: gpu-a100-mig7
    • QOS: normal 14-00:00:00
    • Number of hours: 4
    • Number of nodes: 1
    • Number of tasks: 2

    • Additional Slurm Parameters:

      --reservation=forum-gpu --gres=gpu:1 --mem=32G --ntasks-per-node=2

    • Working Directory:

      /90daydata/shared/${USER}/computer_vision1

    Click Launch. The screen will update to the Interactive Sessions page. When your Jupyter session is ready, the top card will update from Queued to Running and a Connect to JupyterLab Server button will appear. Click Connect to JupyterLab Server.

  8. Open the computer_vision_1.ipynb notebook.

  9. Select the computer_vision_1_env kernel for the notebook.